CDS

Accession Number TCMCG005C35012
gbkey CDS
Protein Id XP_020248097.1
Location join(70311647..70311751,70318495..70318578,70320179..70320253,70322017..70322110,70322302..70322447,70322542..70322613,70324689..70324761,70324838..70324903,70325009..70325055,70326200..70326271,70326497..70326622,70326721..70326786,70331540..70331581,70332470..70332586,70332699..70332781,70335653..70335719,70337507..70337578,70337774..70337824,70338100..70338159,70338237..70338389,70339072..70339389)
Gene LOC109825643
GeneID 109825643
Organism Asparagus officinalis

Protein

Length 662aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020392508.1
Definition THO complex subunit 1 isoform X2

EGGNOG-MAPPER Annotation

COG_category Y
Description THO complex subunit 1 transcription elongation factor
KEGG_TC -
KEGG_Module M00405        [VIEW IN KEGG]
M00406        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12878        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000160        [VIEW IN EMBL-EBI]
GO:0000347        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009723        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009873        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010267        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071369        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGCCGAAAGCTCCATCGGCGCCTCCGTATCCTCCTCCATCAGCCCGTCGAAGACCGCGCCCCCGTTCACGTCTCCAGCCACGCTGATCGAGATCGAGTTCTTGAAGTATTTAGAAGAGTTATATTGCAACCTGCTCTCCCTGAAAACTGTGCCCTTCAAGCAGTACAAGAAGCTATAAAACCTCAGAAACAGACTGTACTTGTCCAAGATGAGAATCAATCTCTGGAAAATGCTCTTCGAACACTACTGCAAGAACTAGTGTCTTCTGCAGTACAATCTGGTGAAAGGATGATGCAATATGGGAAGTCAATTGATGATGGGGAAAATGCTGGCGGTCAAATACCACGTCTTCTTGACATTGTGCTGTATCTTTGTCAAAAAGGGCATGTTGAAGGTGGTATGATATTTCAGCTGTTAGAAGATTTGACGGAGATGTCAACCATGAAAGACTGCAAAGAGGTTTTTGGTTATATCGAGAGCAAGCAAGATGTATTGGGTAAGCAAGAGCTCTTTGGGAGAGGGAAATTGGTGATGCTGAGAACATGCAATCAACTTCTTCGAAGACTCTCAAAGGCAAATGATGTGGTATTTTGTGGACGGATTCTTATGTTTCTTGCACACTTCTTTCCCTTGTCAGAGCGGTCAGCTGTTAATATAAAGGGAGTTTTCAACACATCAAATGTGACCAAATATGAAAAAGATGCTCCTGAAGGAGTCTCCATTGATTTCAACTTCTACAAGACCTTGTGGAGTTTACAGGAACATTTTAGCAATCCAGCTTCAACCACTGTTGCCCCAACCAAGTGGCAGAAGTTCTTCACCAATTTAATGGTTGTACTGGATGCATTTGAAGCTCAGCCTCTGTCTGATGATGATGGAAATGCTAACAATGTTGAGCAAGAGGAAGCTGCTTTTAGCATTAAGTATCTCACTAGCAGCAAGTTGATGGGTTTAGAGTTAAAAGATCCTAGCTTTCGTCGACATATCTTGATCCAGTGCCTTATATTATTTGACTACCTTAAGGCACCTGGAAAGAATGAGAAGGATGGGCCTCCAGAGAGCATGAAAGAGGAAATTAAATCCTGTGAAGAACGTGTGAAGAAGTTGCTCGAAACTATTCCACCAAAAGGCAAGGAGTTCCTTCAAAGTATTGAGCATATATTAGAACGAGAAAAAAATTGGGTCTGGTGGAAACGAGATGGTTGTCCACCATTTGAAAAGCAAATAACTGAAAAAAGAGTGGGTCAAGATGGCGTGAAAAAACGTAAACCACGGTGGAGACTCGGAAACAAAGAGCTATCACAGTTATGGAAATGGGCAGATCAGAATCCTAATGCTTTGACTGATGAACAGCGTGTCCGCACTCCTTCGGTCATGGAGTACTGGAAACCTCTTGCAGAGGATATGGATGAATCTGCTGGGATTGAAGCTGAATATCACCAAAAAAATAACCGTGTTTATTGTTGGAAAGGGCTGCGTTTTTCTGCCAGACAGGACTTGGAAGGATTTTCTCGGTTTACTGACCATGGCATTGAAGGAGTGGTTCCTCCAGAGCTTTTGCCACCAGAAATTCGTTCGAAATTTCATGCTAAACCTACTGAGAAGAATAAACGAGTTAAGAGAGAGGATGATTCAAAAGGTGTTGCAGCTCAGCCTGAAGAAAACCAGGTTGCAACTCCAGCAACTGAGACTGATGGGGGAAGTGGGGCCGAGCTAGAAGAGGGAGCAATTCCAATGGAATCTGATGCCGCAGGCTTGAATATTGCGCAGGGTGGAGATACAACACCAGAAGATGCTACAAAGCAGAGCCCTGATATTGACATGGGCCAGGAGGCAGTACATTCTGAAGCTGAAGCTGAAGCAGAAGCAGATGCAGAAGCAGATGCAGAAGCAGAAGCTGAAGCTGAGGCCAAACCTGATATTAAAGGAGATACTGAATCAGAGCTTAGTCCAGATTCAGAAACAAATCCTGAGACTAAAGATTGA
Protein:  
MRRKLHRRLRILLHQPVEDRAPVHVSSHADRDRVLEVFRRVILQPALPENCALQAVQEAIKPQKQTVLVQDENQSLENALRTLLQELVSSAVQSGERMMQYGKSIDDGENAGGQIPRLLDIVLYLCQKGHVEGGMIFQLLEDLTEMSTMKDCKEVFGYIESKQDVLGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNVTKYEKDAPEGVSIDFNFYKTLWSLQEHFSNPASTTVAPTKWQKFFTNLMVVLDAFEAQPLSDDDGNANNVEQEEAAFSIKYLTSSKLMGLELKDPSFRRHILIQCLILFDYLKAPGKNEKDGPPESMKEEIKSCEERVKKLLETIPPKGKEFLQSIEHILEREKNWVWWKRDGCPPFEKQITEKRVGQDGVKKRKPRWRLGNKELSQLWKWADQNPNALTDEQRVRTPSVMEYWKPLAEDMDESAGIEAEYHQKNNRVYCWKGLRFSARQDLEGFSRFTDHGIEGVVPPELLPPEIRSKFHAKPTEKNKRVKREDDSKGVAAQPEENQVATPATETDGGSGAELEEGAIPMESDAAGLNIAQGGDTTPEDATKQSPDIDMGQEAVHSEAEAEAEADAEADAEAEAEAEAKPDIKGDTESELSPDSETNPETKD